Metin Sitti

Director

Physical Intelligence

+49 711 689-3423

http://nanolab.me.cmu.edu/members/

Overview
Publications

Dr. Metin Sitti is the director of the Physical Intelligence Department at the Max Planck Institute for Intelligent Systems in Stuttgart, Germany. He is also an honorary professor in University of Stuttgart, professor in Koç University, Istanbul, Turkey, and distinguished service professor in Carnegie Mellon University. He was a professor in the Department of Mechanical Engineering and in the Robotics Institute at Carnegie Mellon University, USA (2002-2014) and a research scientist at University of California at Berkeley, USA (1999-2002). He received the BSc (1992) and MSc (1994) degrees in electrical and electronics engineering from Boğaziçi University, Turkey, and the PhD degree (1999) in electrical engineering from the University of Tokyo, Japan.

He is an IEEE Fellow. As selected awards, he received the ERC Advanced Grant (2019), Rahmi Koç Medal of Science (2018), Best Paper Award in the Robotics Science and Systems Conference (2019), IEEE/ASME Best Mechatronics Paper Award (2014), SPIE Nanoengineering Pioneer Award (2011), Best Paper Award in the IEEE/RSJ Intelligent Robots and Systems Conference (1998, 2009), and NSF CAREER Award (2005). He has published over 440 peer-reviewed papers, over 240 of which have appeared in archival journals. He is the editor-in-chief of both Progress in Biomedical Engineering and Journal of Micro-Bio Robotics. His research interests include physical intelligence, small-scale mobile robotics, bio-inspiration, advanced functional micro/nanomaterials, and miniature medical devices.

496 results (View BibTeX file of all listed publications)

2019

Max Planck Institute for Intelligent Systems - Highlights

2019 (mpi_year_book)

Abstract

In the future, artificially intelligent systems will substantially change the way we live, work, and communicate. Intelligent systems will become increasingly important in all spheres of life – as virtual systems on the Internet, or as cyber-physical systems in the real world. Artificial intelligence (AI) will be used for autonomous driving, as well as to diagnose and fight diseases, or to carry out emergency operations that are too dangerous for humans. This is just the beginning.

MPI IS Yearbook 2019 (en) MPI IS Jahresbericht 2019 (de) [BibTex]

2019

Max Planck Institute for Intelligent Systems - Highlights 2019 (mpi_year_book)

MPI IS Yearbook 2019 (en) MPI IS Jahresbericht 2019 (de) MPI IS Jahresbericht 2019 (de) [BibTex]

3D‐Printed Microrobotic Transporters with Recapitulated Stem Cell Niche for Programmable and Active Cell Delivery

Yasa, I. C., Tabak, A. F., Yasa, O., Ceylan, H., Sitti, M.

Advanced Functional Materials, 29, 2019 (article)

DOI [BibTex]

Yasa, I. C., Tabak, A. F., Yasa, O., Ceylan, H., Sitti, M. 3D‐Printed Microrobotic Transporters with Recapitulated Stem Cell Niche for Programmable and Active Cell Delivery Advanced Functional Materials, 29, 2019 (article)

DOI [BibTex]

Multifarious Transit Gates for Programmable Delivery of Bio‐functionalized Matters

Hu, X., Torati, S. R., Kim, H., Yoon, J., Lim, B., Kim, K., Sitti, M., Kim, C.

Small, Wiley Online Library, 2019 (article)

[BibTex]

Hu, X., Torati, S. R., Kim, H., Yoon, J., Lim, B., Kim, K., Sitti, M., Kim, C. Multifarious Transit Gates for Programmable Delivery of Bio‐functionalized Matters Small, Wiley Online Library, 2019 (article)

[BibTex]

Multi-functional soft-bodied jellyfish-like swimming

Ren, Z., Hu, W., Dong, X., Sitti, M.

Nature communications, 10, 2019 (article)

[BibTex]

Ren, Z., Hu, W., Dong, X., Sitti, M. Multi-functional soft-bodied jellyfish-like swimming Nature communications, 10, 2019 (article)

[BibTex]

Welcome to Progress in Biomedical Engineering

Sitti, M.

Progress in Biomedical Engineering, 1, IOP Publishing, 2019 (article)

[BibTex]

Sitti, M. Welcome to Progress in Biomedical Engineering Progress in Biomedical Engineering, 1, IOP Publishing, 2019 (article)

[BibTex]

Precise Control of Lyotropic Chromonic Liquid Crystals Alignment through Surface Topography

Guo, Y., Shahsavan, H., Davidson, Z., Sitti, M.

ACS applied materials \& interfaces, ACS Publications, 2019 (article)

[BibTex]

Guo, Y., Shahsavan, H., Davidson, Z., Sitti, M. Precise Control of Lyotropic Chromonic Liquid Crystals Alignment through Surface Topography ACS applied materials \& interfaces, ACS Publications, 2019 (article)

[BibTex]

3D-Printed Biodegradable Microswimmer for Theranostic Cargo Delivery and Release

Ceylan, H., Yasa, I. C., Yasa, O., Tabak, A. F., Giltinan, J., Sitti, M.

ACS Nano, ACS Publications, 2019 (article)

[BibTex]

Ceylan, H., Yasa, I. C., Yasa, O., Tabak, A. F., Giltinan, J., Sitti, M. 3D-Printed Biodegradable Microswimmer for Theranostic Cargo Delivery and Release ACS Nano, ACS Publications, 2019 (article)

[BibTex]

The near and far of a pair of magnetic capillary disks

Koens, L., Wang, W., Sitti, M., Lauga, E.

Soft Matter, 2019 (article)

DOI [BibTex]

Koens, L., Wang, W., Sitti, M., Lauga, E. The near and far of a pair of magnetic capillary disks Soft Matter, 2019 (article)

DOI [BibTex]

Translational prospects of untethered medical microrobots

Hakan Ceylan, I. C. Y. U. K. W. H. M. S.

Progress in Biomedical Engineering, 1, 2019 (article)

DOI [BibTex]

Hakan Ceylan, I. C. Y. U. K. W. H. M. S. Translational prospects of untethered medical microrobots Progress in Biomedical Engineering, 1, 2019 (article)

DOI [BibTex]

Mechanics of a pressure-controlled adhesive membrane for soft robotic gripping on curved surfaces

Song, S., Drotlef, D., Paik, J., Majidi, C., Sitti, M.

Extreme Mechanics Letters, Elsevier, 2019 (article)

[BibTex]

Song, S., Drotlef, D., Paik, J., Majidi, C., Sitti, M. Mechanics of a pressure-controlled adhesive membrane for soft robotic gripping on curved surfaces Extreme Mechanics Letters, Elsevier, 2019 (article)

[BibTex]

Multifunctional and biodegradable self-propelled protein motors

Pena-Francesch, A., Giltinan, J., Sitti, M.

Nature communications, 10, Nature Publishing Group, 2019 (article)

[BibTex]

Pena-Francesch, A., Giltinan, J., Sitti, M. Multifunctional and biodegradable self-propelled protein motors Nature communications, 10, Nature Publishing Group, 2019 (article)

[BibTex]

Multifunctional magnetic hairbot for untethered osteogenesis, ultrasound contrast imaging and drug delivery

Singh, A. V., Ansari, M. H. D., Dayan, C. B., Giltinan, J., Wang, S., Yu, Y., Kishore, V., Laux, P., Luch, A., Sitti, M.

Biomaterials, 219, Elsevier, 2019 (article)

[BibTex]

Singh, A. V., Ansari, M. H. D., Dayan, C. B., Giltinan, J., Wang, S., Yu, Y., Kishore, V., Laux, P., Luch, A., Sitti, M. Multifunctional magnetic hairbot for untethered osteogenesis, ultrasound contrast imaging and drug delivery Biomaterials, 219, Elsevier, 2019 (article)

[BibTex]

Review of emerging concepts in nanotoxicology: opportunities and challenges for safer nanomaterial design

Singh, A. V., Laux, P., Luch, A., Sudrik, C., Wiehr, S., Wild, A., Santamauro, G., Bill, J., Sitti, M.

Toxicology Mechanisms and Methods, 2019 (article)

[BibTex]

Singh, A. V., Laux, P., Luch, A., Sudrik, C., Wiehr, S., Wild, A., Santamauro, G., Bill, J., Sitti, M. Review of emerging concepts in nanotoxicology: opportunities and challenges for safer nanomaterial design Toxicology Mechanisms and Methods, 2019 (article)

[BibTex]

Graphene oxide synergistically enhances antibiotic efficacy in Vancomycin resistance Staphylococcus aureus

Singh, V., Kumar, V., Kashyap, S., Singh, A. V., Kishore, V., Sitti, M., Saxena, P. S., Srivastava, A.

ACS Applied Bio Materials, ACS Publications, 2019 (article)

[BibTex]

Singh, V., Kumar, V., Kashyap, S., Singh, A. V., Kishore, V., Sitti, M., Saxena, P. S., Srivastava, A. Graphene oxide synergistically enhances antibiotic efficacy in Vancomycin resistance Staphylococcus aureus ACS Applied Bio Materials, ACS Publications, 2019 (article)

[BibTex]

Gecko-inspired composite microfibers for reversible adhesion on smooth and rough surfaces

Drotlef, D., Dayan, C., Sitti, M.

In INTEGRATIVE AND COMPARATIVE BIOLOGY, pages: E58-E58, OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, 2019 (inproceedings)

[BibTex]

Drotlef, D., Dayan, C., Sitti, M. Gecko-inspired composite microfibers for reversible adhesion on smooth and rough surfaces In INTEGRATIVE AND COMPARATIVE BIOLOGY, pages: E58-E58, OXFORD UNIV PRESS INC JOURNALS DEPT, 2001 EVANS RD, CARY, NC 27513 USA, 2019 (inproceedings)

[BibTex]

ENGINEERING Bio-inspired robotic collectives

Sitti, M.

Nature, 567, pages: 314-315, Macmillan Publishers Ltd., London, England, 2019 (article)

[BibTex]

Sitti, M. ENGINEERING Bio-inspired robotic collectives Nature, 567, pages: 314-315, Macmillan Publishers Ltd., London, England, 2019 (article)

[BibTex]

Shape-encoded dynamic assembly of mobile micromachines

Alapan, Y., Yigit, B., Beker, O., Demirörs, A. F., Sitti, M.

Nature, 18, 2019 (article)

[BibTex]

Alapan, Y., Yigit, B., Beker, O., Demirörs, A. F., Sitti, M. Shape-encoded dynamic assembly of mobile micromachines Nature, 18, 2019 (article)

[BibTex]

Peptide-Induced Biomineralization of Tin Oxide (SnO2) Nanoparticles for Antibacterial Applications

Singh, A. V., Jahnke, T., Xiao, Y., Wang, S., Yu, Y., David, H., Richter, G., Laux, P., Luch, A., Srivastava, A., Saxena, P. S., Bill, J., Sitti, M.

Journal of nanoscience and nanotechnology, 19, American Scientific Publishers, 2019 (article)

[BibTex]

Singh, A. V., Jahnke, T., Xiao, Y., Wang, S., Yu, Y., David, H., Richter, G., Laux, P., Luch, A., Srivastava, A., Saxena, P. S., Bill, J., Sitti, M. Peptide-Induced Biomineralization of Tin Oxide (SnO2) Nanoparticles for Antibacterial Applications Journal of nanoscience and nanotechnology, 19, American Scientific Publishers, 2019 (article)

[BibTex]

Optimal controller design for 3D manipulation of buoyant magnetic microrobots via constrained linear quadratic regulation approach

Pedram, A., Pishkenari, H. N., Sitti, M.

Micro-Bio Robotics, 15, 2019 (article)

[BibTex]

Pedram, A., Pishkenari, H. N., Sitti, M. Optimal controller design for 3D manipulation of buoyant magnetic microrobots via constrained linear quadratic regulation approach Micro-Bio Robotics, 15, 2019 (article)

[BibTex]

Microfluidics Integrated Lithography‐Free Nanophotonic Biosensor for the Detection of Small Molecules

Sreekanth, K. V., Sreejith, S., Alapan, Y., Sitti, M., Lim, C. T., Singh, R.

Advanced Optical Materials, 2019 (article)

[BibTex]

Sreekanth, K. V., Sreejith, S., Alapan, Y., Sitti, M., Lim, C. T., Singh, R. Microfluidics Integrated Lithography‐Free Nanophotonic Biosensor for the Detection of Small Molecules Advanced Optical Materials, 2019 (article)

[BibTex]

Mobile microrobots for active therapeutic delivery

Erkoc, P., Yasa, I. C., Ceylan, H., Yasa, O., Alapan, Y., Sitti, M.

Advanced Therapeutics, Wiley Online Library, 2019 (article)

DOI [BibTex]

Erkoc, P., Yasa, I. C., Ceylan, H., Yasa, O., Alapan, Y., Sitti, M. Mobile microrobots for active therapeutic delivery Advanced Therapeutics, Wiley Online Library, 2019 (article)

DOI [BibTex]

Cutting the Cord: Progress in Untethered Soft Robotics and Actuators

Li, M., Ostrovsky-Snider, N. A., Sitti, M., Omenetto, F. G.

MRS Advances, 4, 2019 (article)

DOI [BibTex]

Li, M., Ostrovsky-Snider, N. A., Sitti, M., Omenetto, F. G. Cutting the Cord: Progress in Untethered Soft Robotics and Actuators MRS Advances, 4, 2019 (article)

DOI [BibTex]

Bio-inspired composite microfibers for strong and reversible adhesion on smooth surfaces

Drotlef, D., Dayan, C., Sitti, M.

Integrative and comparative biology, 2019 (article)

[BibTex]

Drotlef, D., Dayan, C., Sitti, M. Bio-inspired composite microfibers for strong and reversible adhesion on smooth surfaces Integrative and comparative biology, 2019 (article)

[BibTex]

Learning to Navigate Endoscopic Capsule Robots

Turan, M., Almalioglu, Y., Gilbert, H. B., Mahmood, F., Durr, N. J., Araujo, H., Sarı, A. E., Ajay, A., Sitti, M.

IEEE Robotics and Automation Letters, 4, 2019 (article)

[BibTex]

Turan, M., Almalioglu, Y., Gilbert, H. B., Mahmood, F., Durr, N. J., Araujo, H., Sarı, A. E., Ajay, A., Sitti, M. Learning to Navigate Endoscopic Capsule Robots IEEE Robotics and Automation Letters, 4, 2019 (article)

[BibTex]

Elevation and Azimuth Rotational Actuation of an Untethered Millirobot by MRI Gradient Coils

Erin, O., Gilbert, H. B., Tabak, A. F., Sitti, M.

IEEE Transactions on Robotics, IEEE, 2019 (article)

[BibTex]

Erin, O., Gilbert, H. B., Tabak, A. F., Sitti, M. Elevation and Azimuth Rotational Actuation of an Untethered Millirobot by MRI Gradient Coils IEEE Transactions on Robotics, IEEE, 2019 (article)

[BibTex]

Order and Information in the Phases of a Torque-driven Artificial Collective System

Wang, W., Gardi, G., Kishore, V., Koens, L., Son, D., Gilbert, H., Harwani, P., Lauga, E., Sitti, M.

arXiv preprint arXiv:1910.11226, 2019 (article)

[BibTex]

Wang, W., Gardi, G., Kishore, V., Koens, L., Son, D., Gilbert, H., Harwani, P., Lauga, E., Sitti, M. Order and Information in the Phases of a Torque-driven Artificial Collective System arXiv preprint arXiv:1910.11226, 2019 (article)

[BibTex]

Simultaneous Six-Degree-of-Freedom Control of a Single-Body Magnetic Microrobot

Giltinan, J., Sitti, M.

IEEE Robotics and Automation Letters, 4, 2019 (article)

[BibTex]

Giltinan, J., Sitti, M. Simultaneous Six-Degree-of-Freedom Control of a Single-Body Magnetic Microrobot IEEE Robotics and Automation Letters, 4, 2019 (article)

[BibTex]

Electromechanical actuation of dielectric liquid crystal elastomers for soft robotics

Davidson, Z., Shahsavan, H., Guo, Y., Hines, L., Xia, Y., Yang, S., Sitti, M.

Bulletin of the American Physical Society, APS, 2019 (article)

[BibTex]

Davidson, Z., Shahsavan, H., Guo, Y., Hines, L., Xia, Y., Yang, S., Sitti, M. Electromechanical actuation of dielectric liquid crystal elastomers for soft robotics Bulletin of the American Physical Society, APS, 2019 (article)

[BibTex]

Monolithic shape-programmable dielectric liquid crystal elastomer actuators

Davidson, Z. S., Shahsavan, H., Aghakhani, A., Guo, Y., Hines, L., Xia, Y., Yang, S., Sitti, M.

Science Advances, 2019 (article)

DOI [BibTex]

Davidson, Z. S., Shahsavan, H., Aghakhani, A., Guo, Y., Hines, L., Xia, Y., Yang, S., Sitti, M. Monolithic shape-programmable dielectric liquid crystal elastomer actuators Science Advances, 2019 (article)

DOI [BibTex]

2018

Swimming Back and Forth Using Planar Flagellar Propulsion at Low Reynolds Numbers

Khalil, I. S. M., Tabak, A. F., Hamed, Y., Mitwally, M. E., Tawakol, M., Klingner, A., Sitti, M.

Advanced Science, 5(2):1700461, 2018 (article)

Abstract

Abstract Peritrichously flagellated Escherichia coli swim back and forth by wrapping their flagella together in a helical bundle. However, other monotrichous bacteria cannot swim back and forth with a single flagellum and planar wave propagation. Quantifying this observation, a magnetically driven soft two‐tailed microrobot capable of reversing its swimming direction without making a U‐turn trajectory or actively modifying the direction of wave propagation is designed and developed. The microrobot contains magnetic microparticles within the polymer matrix of its head and consists of two collinear, unequal, and opposite ultrathin tails. It is driven and steered using a uniform magnetic field along the direction of motion with a sinusoidally varying orthogonal component. Distinct reversal frequencies that enable selective and independent excitation of the first or the second tail of the microrobot based on their tail length ratio are found. While the first tail provides a propulsive force below one of the reversal frequencies, the second is almost passive, and the net propulsive force achieves flagellated motion along one direction. On the other hand, the second tail achieves flagellated propulsion along the opposite direction above the reversal frequency.

link (url) DOI [BibTex]

2018

Khalil, I. S. M., Tabak, A. F., Hamed, Y., Mitwally, M. E., Tawakol, M., Klingner, A., Sitti, M. Swimming Back and Forth Using Planar Flagellar Propulsion at Low Reynolds Numbers Advanced Science, 5(2):1700461, 2018 (article)

link (url) DOI [BibTex]

Universal Custom Complex Magnetic Spring Design Methodology

Woodward, M. A., Sitti, M.

IEEE Transactions on Magnetics, 54(1):1-13, October 2018 (article)

Abstract

A design methodology is presented for creating custom complex magnetic springs through the design of force-displacement curves. This methodology results in a magnet configuration, which will produce a desired force-displacement relationship. Initially, the problem is formulated and solved as a system of linear equations. Then, given the limited likelihood of a single solution being feasibly manufactured, key parameters of the solution are extracted and varied to create a family of solutions. Finally, these solutions are refined using numerical optimization. Given the properties of magnets, this methodology can create any well-defined function of force versus displacement and is model-independent. To demonstrate this flexibility, a number of example magnetic springs are designed; one of which, designed for use in a jumping-gliding robot's shape memory alloy actuated clutch, is manufactured and experimentally characterized. Due to the scaling of magnetic forces, the displacement region which these magnetic springs are most applicable is that of millimeters and below. However, this region is well situated for miniature robots and smart material actuators, where a tailored magnetic spring, designed to compliment a component, can enhance its performance while adding new functionality. The methodology is also expendable to variable interactions and multi-dimensional magnetic field design.

DOI [BibTex]

Woodward, M. A., Sitti, M. Universal Custom Complex Magnetic Spring Design Methodology IEEE Transactions on Magnetics, 54(1):1-13, October 2018 (article)

DOI [BibTex]

Microalga‐Powered Microswimmers toward Active Cargo Delivery

Yasa, O., Erkoc, P., Alapan, Y., Sitti, M.

Advanced Materials, pages: 1804130, September 2018 (article)

Microalga‐Powered Microswimmers toward Active Cargo Delivery DOI Project Page [BibTex]

Yasa, O., Erkoc, P., Alapan, Y., Sitti, M. Microalga‐Powered Microswimmers toward Active Cargo Delivery Advanced Materials, pages: 1804130, September 2018 (article)

Microalga‐Powered Microswimmers toward Active Cargo Delivery DOI Project Page [BibTex]

Light-Triggered Drug Release from 3D-Printed Magnetic Chitosan Microswimmers

Ugur Bozuyuk, , Oncay Yasa, , I. Ceren Yasa, , Hakan Ceylan, , Seda Kizilel, , Sitti, M.

ACS Nano, 12, pages: 9617-9625, September 2018 (article)

DOI Project Page [BibTex]

Ugur Bozuyuk, , Oncay Yasa, , I. Ceren Yasa, , Hakan Ceylan, , Seda Kizilel, , Sitti, M. Light-Triggered Drug Release from 3D-Printed Magnetic Chitosan Microswimmers ACS Nano, 12, pages: 9617-9625, September 2018 (article)

DOI Project Page [BibTex]

3D-Printed Biodegradable Microswimmer for Drug Delivery and Targeted Cell Labeling

Hakan Ceylan, , I. Ceren Yasa, , Oncay Yasa, , Ahmet Fatih Tabak, , Joshua Giltinan, , Sitti, M.

bioRxiv, pages: 379024, July 2018 (article)

Abstract

Miniaturization of interventional medical devices can leverage minimally invasive technologies by enabling operational resolution at cellular length scales with high precision and repeatability. Untethered micron-scale mobile robots can realize this by navigating and performing in hard-to-reach, confined and delicate inner body sites. However, such a complex task requires an integrated design and engineering strategy, where powering, control, environmental sensing, medical functionality and biodegradability need to be considered altogether. The present study reports a hydrogel-based, biodegradable microrobotic swimmer, which is responsive to the changes in its microenvironment for theranostic cargo delivery and release tasks. We design a double-helical magnetic microswimmer of 20 micrometers length, which is 3D-printed with complex geometrical and compositional features. At normal physiological concentrations, matrix metalloproteinase-2 (MMP-2) enzyme can entirely degrade the microswimmer body in 118 h to solubilized non-toxic products. The microswimmer can respond to the pathological concentrations of MMP-2 by swelling and thereby accelerating the release kinetics of the drug payload. Anti-ErbB 2 antibody-tagged magnetic nanoparticles released from the degraded microswimmers serve for targeted labeling of SKBR3 breast cancer cells to realize the potential of medical imaging of local tissue sites following the therapeutic intervention. These results represent a leap forward toward clinical medical microrobots that are capable of sensing, responding to the local pathological information, and performing specific therapeutic and diagnostic tasks as orderly executed operations using their smart composite material architectures.

DOI Project Page [BibTex]

Hakan Ceylan, , I. Ceren Yasa, , Oncay Yasa, , Ahmet Fatih Tabak, , Joshua Giltinan, , Sitti, M. 3D-Printed Biodegradable Microswimmer for Drug Delivery and Targeted Cell Labeling bioRxiv, pages: 379024, July 2018 (article)

DOI Project Page [BibTex]

Innate turning preference of leaf-cutting ants in the absence of external orientation cues

Endlein, T., Sitti, M.

Journal of Experimental Biology, The Company of Biologists Ltd, June 2018 (article)

Abstract

Many ants use a combination of cues for orientation but how do ants find their way when all external cues are suppressed? Do they walk in a random way or are their movements spatially oriented? Here we show for the first time that leaf-cutting ants (Acromyrmex lundii) have an innate preference of turning counter-clockwise (left) when external cues are precluded. We demonstrated this by allowing individual ants to run freely on the water surface of a newly-developed treadmill. The surface tension supported medium-sized workers but effectively prevented ants from reaching the wall of the vessel, important to avoid wall-following behaviour (thigmotaxis). Most ants ran for minutes on the spot but also slowly turned counter-clockwise in the absence of visual cues. Reconstructing the effectively walked path revealed a looping pattern which could be interpreted as a search strategy. A similar turning bias was shown for groups of ants in a symmetrical Y-maze where twice as many ants chose the left branch in the absence of optical cues. Wall-following behaviour was tested by inserting a coiled tube before the Y-fork. When ants traversed a left-coiled tube, more ants chose the left box and vice versa. Adding visual cues in form of vertical black strips either outside the treadmill or on one branch of the Y-maze led to oriented walks towards the strips. It is suggested that both, the turning bias and the wall-following are employed as search strategies for an unknown environment which can be overridden by visual cues.

link (url) DOI [BibTex]

Endlein, T., Sitti, M. Innate turning preference of leaf-cutting ants in the absence of external orientation cues Journal of Experimental Biology, The Company of Biologists Ltd, June 2018 (article)

link (url) DOI [BibTex]

Motility and chemotaxis of bacteria-driven microswimmers fabricated using antigen 43-mediated biotin display

Schauer, O., Mostaghaci, B., Colin, R., Hürtgen, D., Kraus, D., Sitti, M., Sourjik, V.

Scientific Reports, 8(1):9801, Nature Publishing Group, June 2018 (article)

Abstract

Bacteria-driven biohybrid microswimmers (bacteriabots) combine synthetic cargo with motile living bacteria that enable propulsion and steering. Although fabrication and potential use of such bacteriabots have attracted much attention, existing methods of fabrication require an extensive sample preparation that can drastically decrease the viability and motility of bacteria. Moreover, chemotactic behavior of bacteriabots in a liquid medium with chemical gradients has remained largely unclear. To overcome these shortcomings, we designed Escherichia coli to autonomously display biotin on its cell surface via the engineered autotransporter antigen 43 and thus to bind streptavidin-coated cargo. We show that the cargo attachment to these bacteria is greatly enhanced by motility and occurs predominantly at the cell poles, which is greatly beneficial for the fabrication of motile bacteriabots. We further performed a systemic study to understand and optimize the ability of these bacteriabots to follow chemical gradients. We demonstrate that the chemotaxis of bacteriabots is primarily limited by the cargo-dependent reduction of swimming speed and show that the fabrication of bacteriabots using elongated E. coli cells can be used to overcome this limitation.

link (url) DOI [BibTex]

Schauer, O., Mostaghaci, B., Colin, R., Hürtgen, D., Kraus, D., Sitti, M., Sourjik, V. Motility and chemotaxis of bacteria-driven microswimmers fabricated using antigen 43-mediated biotin display Scientific Reports, 8(1):9801, Nature Publishing Group, June 2018 (article)

link (url) DOI [BibTex]

Multifunctional ferrofluid-infused surfaces with reconfigurable multiscale topography

Nature, June 2018 (article)

Abstract

Developing adaptive materials with geometries that change in response to external stimuli provides fundamental insights into the links between the physical forces involved and the resultant morphologies and creates a foundation for technologically relevant dynamic systems1,2. In particular, reconfigurable surface topography as a means to control interfacial properties 3 has recently been explored using responsive gels 4 , shape-memory polymers 5 , liquid crystals6-8 and hybrid composites9-14, including magnetically active slippery surfaces12-14. However, these designs exhibit a limited range of topographical changes and thus a restricted scope of function. Here we introduce a hierarchical magneto-responsive composite surface, made by infiltrating a ferrofluid into a microstructured matrix (termed ferrofluid-containing liquid-infused porous surfaces, or FLIPS). We demonstrate various topographical reconfigurations at multiple length scales and a broad range of associated emergent behaviours. An applied magnetic-field gradient induces the movement of magnetic nanoparticles suspended in the ferrofluid, which leads to microscale flow of the ferrofluid first above and then within the microstructured surface. This redistribution changes the initially smooth surface of the ferrofluid (which is immobilized by the porous matrix through capillary forces) into various multiscale hierarchical topographies shaped by the size, arrangement and orientation of the confining microstructures in the magnetic field. We analyse the spatial and temporal dynamics of these reconfigurations theoretically and experimentally as a function of the balance between capillary and magnetic pressures15-19 and of the geometric anisotropy of the FLIPS system. Several interesting functions at three different length scales are demonstrated: self-assembly of colloidal particles at the micrometre scale; regulated flow of liquid droplets at the millimetre scale; and switchable adhesion and friction, liquid pumping and removal of biofilms at the centimetre scale. We envision that FLIPS could be used as part of integrated control systems for the manipulation and transport of matter, thermal management, microfluidics and fouling-release materials.

link (url) DOI [BibTex]

Wang, W., Timonen, J. V. I., Carlson, A., Drotlef, D., Zhang, C. T., Kolle, S., Grinthal, A., Wong, T., Hatton, B., Kang, S. H., Kennedy, S., Chi, J., Blough, R. T., Sitti, M., Mahadevan, L., Aizenberg, J. Multifunctional ferrofluid-infused surfaces with reconfigurable multiscale topography Nature, June 2018 (article)

link (url) DOI [BibTex]

Self-Sensing Paper Actuators Based on Graphite–Carbon Nanotube Hybrid Films

Amjadi, M., Sitti, M.

Advanced Science, pages: 1800239, May 2018 (article)

Abstract

Abstract Soft actuators have demonstrated potential in a range of applications, including soft robotics, artificial muscles, and biomimetic devices. However, the majority of current soft actuators suffer from the lack of real-time sensory feedback, prohibiting their effective sensing and multitask function. Here, a promising strategy is reported to design bilayer electrothermal actuators capable of simultaneous actuation and sensation (i.e., self-sensing actuators), merely through two input electric terminals. Decoupled electrothermal stimulation and strain sensation is achieved by the optimal combination of graphite microparticles and carbon nanotubes (CNTs) in the form of hybrid films. By finely tuning the charge transport properties of hybrid films, the signal-to-noise ratio (SNR) of self-sensing actuators is remarkably enhanced to over 66. As a result, self-sensing actuators can actively track their displacement and distinguish the touch of soft and hard objects.

link (url) DOI Project Page [BibTex]

Amjadi, M., Sitti, M. Self-Sensing Paper Actuators Based on Graphite–Carbon Nanotube Hybrid Films Advanced Science, pages: 1800239, May 2018 (article)

link (url) DOI Project Page [BibTex]

Soft erythrocyte-based bacterial microswimmers for cargo delivery

Alapan, Y., Yasa, O., Schauer, O., Giltinan, J., Tabak, A. F., Sourjik, V., Sitti, M.

Science Robotics, 3(17):eaar4423, Science Robotics, April 2018 (article)

Abstract

Bacteria-propelled biohybrid microswimmers have recently shown to be able to actively transport and deliver cargos encapsulated into their synthetic constructs to specific regions locally. However, usage of synthetic materials as cargo carriers can result in inferior performance in load-carrying efficiency, biocompatibility, and biodegradability, impeding clinical translation of biohybrid microswimmers. Here, we report construction and external guidance of bacteria-driven microswimmers using red blood cells (RBCs; erythrocytes) as autologous cargo carriers for active and guided drug delivery. Multifunctional biohybrid microswimmers were fabricated by attachment of RBCs [loaded with anticancer doxorubicin drug molecules and superparamagnetic iron oxide nanoparticles (SPIONs)] to bioengineered motile bacteria, Escherichia coli MG1655, via biotin-avidin-biotin binding complex. Autonomous and on-board propulsion of biohybrid microswimmers was provided by bacteria, and their external magnetic guidance was enabled by SPIONs loaded into the RBCs. Furthermore, bacteria-driven RBC microswimmers displayed preserved deformability and attachment stability even after squeezing in microchannels smaller than their sizes, as in the case of bare RBCs. In addition, an on-demand light-activated hyperthermia termination switch was engineered for RBC microswimmers to control bacteria population after operations. RBCs, as biological and autologous cargo carriers in the biohybrid microswimmers, offer notable advantages in stability, deformability, biocompatibility, and biodegradability over synthetic cargo-carrier materials. The biohybrid microswimmer design presented here transforms RBCs from passive cargo carriers into active and guidable cargo carriers toward targeted drug and other cargo delivery applications in medicine.

link (url) DOI Project Page Project Page [BibTex]

Alapan, Y., Yasa, O., Schauer, O., Giltinan, J., Tabak, A. F., Sourjik, V., Sitti, M. Soft erythrocyte-based bacterial microswimmers for cargo delivery Science Robotics, 3(17):eaar4423, Science Robotics, April 2018 (article)

link (url) DOI Project Page Project Page [BibTex]

Miniature soft robots – road to the clinic

Sitti, M.

Nature Reviews Materials, April 2018 (article)

Abstract

Soft small robots offer the opportunity to non-invasively access human tissue to perform medical operations and deliver drugs; however, challenges in materials design, biocompatibility and function control remain to be overcome for soft robots to reach the clinic.

link (url) DOI [BibTex]

Sitti, M. Miniature soft robots – road to the clinic Nature Reviews Materials, April 2018 (article)

link (url) DOI [BibTex]

Wrinkling Instability and Adhesion of a Highly Bendable Gallium Oxide Nanofilm Encapsulating a Liquid-Gallium Droplet

Yunusa, M., Amador, G. J., Drotlef, D., Sitti, M.

Nano Letters, 18(4):2498-2504, March 2018 (article)

Abstract

The wrinkling and interfacial adhesion mechanics of a gallium-oxide nanofilm encapsulating a liquid-gallium droplet are presented. The native oxide nanofilm provides mechanical stability by preventing the flow of the liquid metal. We show how a crumpled oxide skin a few nanometers thick behaves akin to a highly bendable elastic nanofilm under ambient conditions. Upon compression, a wrinkling instability emerges at the contact interface to relieve the applied stress. As the load is further increased, radial wrinkles evolve, and, eventually, the oxide nanofilm ruptures. The observed wrinkling closely resembles the instability experienced by nanofilms under axisymmetric loading, thus providing further insights into the behaviors of elastic nanofilms. Moreover, the mechanical attributes of the oxide skin enable high surface conformation by exhibiting liquid-like behavior. We measured an adhesion energy of 0.238 ± 0.008 J m–2 between a liquid-gallium droplet and smooth flat glass, which is close to the measurements of thin-sheet nanomaterials such as graphene on silicon dioxide.

link (url) DOI [BibTex]

Yunusa, M., Amador, G. J., Drotlef, D., Sitti, M. Wrinkling Instability and Adhesion of a Highly Bendable Gallium Oxide Nanofilm Encapsulating a Liquid-Gallium Droplet Nano Letters, 18(4):2498-2504, March 2018 (article)

link (url) DOI [BibTex]

Magnetic-Visual Sensor Fusion-based Dense 3D Reconstruction and Localization for Endoscopic Capsule Robots

Turan, M., Almalioglu, Y., Ornek, E. P., Araujo, H., Yanik, M. F., Sitti, M.

ArXiv e-prints, March 2018 (article)

Abstract

Reliable and real-time 3D reconstruction and localization functionality is a crucial prerequisite for the navigation of actively controlled capsule endoscopic robots as an emerging, minimally invasive diagnostic and therapeutic technology for use in the gastrointestinal (GI) tract. In this study, we propose a fully dense, non-rigidly deformable, strictly real-time, intraoperative map fusion approach for actively controlled endoscopic capsule robot applications which combines magnetic and vision-based localization, with non-rigid deformations based frame-to-model map fusion. The performance of the proposed method is demonstrated using four different ex-vivo porcine stomach models. Across different trajectories of varying speed and complexity, and four different endoscopic cameras, the root mean square surface reconstruction errors 1.58 to 2.17 cm.

link (url) [BibTex]

Turan, M., Almalioglu, Y., Ornek, E. P., Araujo, H., Yanik, M. F., Sitti, M. Magnetic-Visual Sensor Fusion-based Dense 3D Reconstruction and Localization for Endoscopic Capsule Robots ArXiv e-prints, March 2018 (article)

link (url) [BibTex]

Unsupervised Odometry and Depth Learning for Endoscopic Capsule Robots

Turan, M., Ornek, E. P., Ibrahimli, N., Giracoglu, C., Almalioglu, Y., Yanik, M. F., Sitti, M.

ArXiv e-prints, March 2018 (article)

Abstract

In the last decade, many medical companies and research groups have tried to convert passive capsule endoscopes as an emerging and minimally invasive diagnostic technology into actively steerable endoscopic capsule robots which will provide more intuitive disease detection, targeted drug delivery and biopsy-like operations in the gastrointestinal(GI) tract. In this study, we introduce a fully unsupervised, real-time odometry and depth learner for monocular endoscopic capsule robots. We establish the supervision by warping view sequences and assigning the re-projection minimization to the loss function, which we adopt in multi-view pose estimation and single-view depth estimation network. Detailed quantitative and qualitative analyses of the proposed framework performed on non-rigidly deformable ex-vivo porcine stomach datasets proves the effectiveness of the method in terms of motion estimation and depth recovery.

link (url) [BibTex]

Turan, M., Ornek, E. P., Ibrahimli, N., Giracoglu, C., Almalioglu, Y., Yanik, M. F., Sitti, M. Unsupervised Odometry and Depth Learning for Endoscopic Capsule Robots ArXiv e-prints, March 2018 (article)

link (url) [BibTex]

Self‐Folded Hydrogel Tubes for Implantable Muscular Tissue Scaffolds

Vannozzi, L., Yasa, I. C., Ceylan, H., Menciassi, A., Ricotti, L., Sitti, M.

Macromolecular Bioscience, (0), March 2018 (article)

Abstract

Abstract Programming materials with tunable physical and chemical interactions among its components pave the way of generating 3D functional active microsystems with various potential applications in tissue engineering, drug delivery, and soft robotics. Here, the development of a recapitulated fascicle‐like implantable muscle construct by programmed self‐folding of poly(ethylene glycol) diacrylate hydrogels is reported. The system comprises two stacked layers, each with differential swelling degrees, stiffnesses, and thicknesses in 2D, which folds into a 3D tube together. Inside the tubes, muscle cell adhesion and their spatial alignment are controlled. Both skeletal and cardiac muscle cells also exhibit high viability, and cardiac myocytes preserve their contractile function over the course of 7 d. Integration of biological cells with smart, shape‐changing materials could give rise to the development of new cellular constructs for hierarchical tissue assembly, drug testing platforms, and biohybrid actuators that can perform sophisticated tasks.

link (url) DOI [BibTex]

Vannozzi, L., Yasa, I. C., Ceylan, H., Menciassi, A., Ricotti, L., Sitti, M. Self‐Folded Hydrogel Tubes for Implantable Muscular Tissue Scaffolds Macromolecular Bioscience, (0), March 2018 (article)

link (url) DOI [BibTex]

Redox metals homeostasis in multiple sclerosis and amyotrophic lateral sclerosis: a review

Sheykhansari, S., Kozielski, K., Bill, J., Sitti, M., Gemmati, D., Zamboni, P., Singh, A. V.

Cell Death \& Disease, 9(3):348, March 2018 (article)

Abstract

The effect of redox metals such as iron and copper on multiple sclerosis and amyotrophic lateral sclerosis has been intensively studied. However, the origin of these disorders remains uncertain. This review article critically describes the physiology of redox metals that produce oxidative stress, which in turn leads to cascades of immunomodulatory alteration of neurons in multiple sclerosis and amyotrophic lateral sclerosis. Iron and copper overload has been well established in motor neurons of these diseases' lesions. On the other hand, the role of other metals like cadmium participating indirectly in the redox cascade of neurobiological mechanism is less studied. In the second part of this review, we focus on this less conspicuous correlation between cadmium as an inactive-redox metal and multiple sclerosis and amyotrophic lateral sclerosis, providing novel treatment modalities and approaches as future prospects.

link (url) DOI [BibTex]

Sheykhansari, S., Kozielski, K., Bill, J., Sitti, M., Gemmati, D., Zamboni, P., Singh, A. V. Redox metals homeostasis in multiple sclerosis and amyotrophic lateral sclerosis: a review Cell Death \& Disease, 9(3):348, March 2018 (article)

link (url) DOI [BibTex]

Cancer cells biomineralize ionic gold into nanoparticles-microplates via secreting defense proteins with specific gold-binding peptides

Singh, A. V., Jahnke, T., Kishore, V., Park, B., Batuwangala, M., Bill, J., Sitti, M.

Acta Biomaterialia, March 2018 (article)

Abstract

Cancer cells have the capacity to synthesize nanoparticles (NPs). The detailed mechanism of this process is not very well documented. We report the mechanism of biomineralization of aqueous gold chloride into NPs and microplates in the breast-cancer cell line MCF7. Spherical gold NPs are synthesized in these cells in the presence of serum in the culture media by the reduction of HAuCl4. In the absence of serum, the cells exhibit gold microplate formation through seed-mediate growth albeit slower reduction. The structural characteristics of the two types of NPs under different media conditions were confirmed using scanning electron microscopy (SEM); crystallinity and metallic properties were assessed with transmission electron microscopy (TEM) and x-ray photoelectron spectroscopy (XPS). Gold-reducing proteins, related to cell stress initiate the biomineralization of HAuCl4 in cells (under serum free conditions) as confirmed by infrared (IR) spectroscopy. MCF7 cells undergo irreversible replicative senescence when exposed to a high concentration of ionic gold and conversely remain in a dormant reversible quiescent state when exposed to a low gold concentration. The latter cellular state was achievable in the presence of the rho/ROCK inhibitor Y-27632. Proteomic analysis revealed consistent expression of specific proteins under serum and serum-free conditions. A high-throughput proteomic approach to screen gold-reducing proteins and peptide sequences was utilized and validated by quartz crystal microbalance with dissipation (QCM-D). Statement of significance Cancer cells are known to synthesize gold nanoparticles and microstructures, which are promising for bioimaging and other therapeutic applications. However, the detailed mechanism of such biomineralization process is not well understood yet. Herein, we demonstrate that cancer cells exposed to gold ions (grown in serum/serum-free conditions) secrete shock and stress-related proteins with specific gold-binding/reducing polypeptides. Cells undergo reversible senescence and can recover normal physiology when treated with the senescence inhibitor depending on culture condition. The use of mammalian cells as microincubators for synthesis of such particles could have potential influence on their uptake and biocompatibility. This study has important implications for in-situ reduction of ionic gold to anisotropic micro-nanostructures that could be used in-vivo clinical applications and tumor photothermal therapy.

link (url) DOI [BibTex]

Singh, A. V., Jahnke, T., Kishore, V., Park, B., Batuwangala, M., Bill, J., Sitti, M. Cancer cells biomineralize ionic gold into nanoparticles-microplates via secreting defense proteins with specific gold-binding peptides Acta Biomaterialia, March 2018 (article)

link (url) DOI [BibTex]

Thermocapillary-driven fluid flow within microchannels

Amador, G. J., Tabak, A. F., Ren, Z., Alapan, Y., Yasa, O., Sitti, M.

ArXiv e-prints, Febuary 2018 (article)

Abstract

Surface tension gradients induce Marangoni flow, which may be exploited for fluid transport. At the micrometer scale, these surface-driven flows can be more significant than those driven by pressure. By introducing fluid-fluid interfaces on the walls of microfluidic channels, we use surface tension gradients to drive bulk fluid flows. The gradients are specifically induced through thermal energy, exploiting the temperature dependence of a fluid-fluid interface to generate thermocapillary flow. In this report, we provide the design concept for a biocompatible, thermocapillary microchannel capable of being powered by solar irradiation. Using temperature gradients on the order of degrees Celsius per centimeter, we achieve fluid velocities on the order of millimeters per second. Following experimental observations, fluid dynamic models, and numerical simulation, we find that the fluid velocity is linearly proportional to the provided temperature gradient, enabling full control of the fluid flow within the microchannels.

link (url) Project Page [BibTex]

Amador, G. J., Tabak, A. F., Ren, Z., Alapan, Y., Yasa, O., Sitti, M. Thermocapillary-driven fluid flow within microchannels ArXiv e-prints, Febuary 2018 (article)

link (url) Project Page [BibTex]

Sparse-then-dense alignment-based 3D map reconstruction method for endoscopic capsule robots

Turan, M., Pilavci, Y. Y., Ganiyusufoglu, I., Araujo, H., Konukoglu, E., Sitti, M.

Machine Vision and Applications, 29(2):345-359, Febuary 2018 (article)

Abstract

Despite significant progress achieved in the last decade to convert passive capsule endoscopes to actively controllable robots, robotic capsule endoscopy still has some challenges. In particular, a fully dense three-dimensional (3D) map reconstruction of the explored organ remains an unsolved problem. Such a dense map would help doctors detect the locations and sizes of the diseased areas more reliably, resulting in more accurate diagnoses. In this study, we propose a comprehensive medical 3D reconstruction method for endoscopic capsule robots, which is built in a modular fashion including preprocessing, keyframe selection, sparse-then-dense alignment-based pose estimation, bundle fusion, and shading-based 3D reconstruction. A detailed quantitative analysis is performed using a non-rigid esophagus gastroduodenoscopy simulator, four different endoscopic cameras, a magnetically activated soft capsule robot, a sub-millimeter precise optical motion tracker, and a fine-scale 3D optical scanner, whereas qualitative ex-vivo experiments are performed on a porcine pig stomach. To the best of our knowledge, this study is the first complete endoscopic 3D map reconstruction approach containing all of the necessary functionalities for a therapeutically relevant 3D map reconstruction.

link (url) DOI [BibTex]

Turan, M., Pilavci, Y. Y., Ganiyusufoglu, I., Araujo, H., Konukoglu, E., Sitti, M. Sparse-then-dense alignment-based 3D map reconstruction method for endoscopic capsule robots Machine Vision and Applications, 29(2):345-359, Febuary 2018 (article)

link (url) DOI [BibTex]

Independent Actuation of Two-Tailed Microrobots

Khalil, I. S. M., Tabak, A. F., Hamed, Y., Tawakol, M., Klingner, A., Gohary, N. E., Mizaikoff, B., Sitti, M.

IEEE Robotics and Automation Letters, 3(3):1703-1710, Febuary 2018 (article)

Abstract

A soft two-tailed microrobot in low Reynolds number fluids does not achieve forward locomotion by identical tails regardless to its wiggling frequency. If the tails are nonidentical, zero forward locomotion is also observed at specific oscillation frequencies (which we refer to as the reversal frequencies), as the propulsive forces imparted to the fluid by each tail are almost equal in magnitude and opposite in direction. We find distinct reversal frequencies for the two-tailed microrobots based on their tail length ratio. At these frequencies, the microrobot achieves negligible net displacement under the influence of a periodic magnetic field. This observation allows us to fabricate groups of microrobots with tail length ratio of 1.24 ± 0.11, 1.48 ± 0.08, and 1.71 ± 0.09. We demonstrate selective actuation of microrobots based on prior characterization of their reversal frequencies. We also implement simultaneous flagellar propulsion of two microrobots and show that they can be controlled to swim along the same direction and opposite to each other using common periodic magnetic fields. In addition, independent motion control of two microrobots is achieved toward two different reference positions with average steady-state error of 110.1 ± 91.8 μm and 146.9 ± 105.9 μm.

link (url) DOI [BibTex]

Khalil, I. S. M., Tabak, A. F., Hamed, Y., Tawakol, M., Klingner, A., Gohary, N. E., Mizaikoff, B., Sitti, M. Independent Actuation of Two-Tailed Microrobots IEEE Robotics and Automation Letters, 3(3):1703-1710, Febuary 2018 (article)

link (url) DOI [BibTex]

Recent Advances in Wearable Transdermal Delivery Systems

Amjadi, M., Sheykhansari, S., Nelson, B. J., Sitti, M.

Advanced Materials, 30(7):1704530, January 2018 (article)

Abstract

Abstract Wearable transdermal delivery systems have recently received tremendous attention due to their noninvasive, convenient, and prolonged administration of pharmacological agents. Here, the material prospects, fabrication processes, and drug‐release mechanisms of these types of therapeutic delivery systems are critically reviewed. The latest progress in the development of multifunctional wearable devices capable of closed‐loop sensation and drug delivery is also discussed. This survey reveals that wearable transdermal delivery has already made an impact in diverse healthcare applications, while several grand challenges remain.

link (url) DOI [BibTex]

Amjadi, M., Sheykhansari, S., Nelson, B. J., Sitti, M. Recent Advances in Wearable Transdermal Delivery Systems Advanced Materials, 30(7):1704530, January 2018 (article)

link (url) DOI [BibTex]

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